Accomplished last month:

O. lurida 2017-2018 project (OA/Temp carryover)

• Revised MS based on co-author feedback and for general improvements
• Sent for 2nd round of comments.

O. lurida 2018 project (Temp/Food carryover)

• Finished 1st draft discussion
• Correlated CV for larval shell length/width with # larvae released that day (is CV higher with more larvae?) Answer: no.

Bypass & admin:

• Compiled draft application, including draft dissertation
• Scheduled committee meeting

NSF GRFP

• Met with Krista N. re: NSF GRIP, interesting Dungeness crab project looking at larval epigenomes in various pCO2
• Submitted NSF GRFP funding request for next year (final year)

Oly methylation data:

• Pulled matrices for Katherine

Oly QuantSeq data & future steps:

• Expanded plan of attack. Would like to include some juvenile Port Gamble whole-body samples to compare those with high pCO2 parental histories vs. no history, in the location where parental history correlated with survival

Goals / To Do List

Admin

• Prepare committee meeting presentation, meeting agenda, list of items needed / questions
• Revise bypass application based on committee input
• Submit bypass
• Schedule qualifying exam
• NSA quarterly newsletter

O. lurida 2017-2018 project (OA/Temp carryover)

• Write cover letter for journal submission
• Revise MS based on 2nd round of co-author feedback
• Submit!

O. lurida 2018 project (Temp/Food carryover)

• Calculate degree-days until larval release onset for all spawning tanks (if possible).
• Figure out how to do broodstock survival analysis, then do it
• Write Intro
• Finalize plots
• Send to co-authors

Oly QuantSeq:

• Start testing QuantSeq analysis pipeline with Oly genome, Salmon (removing the multiple read/transcript auto-correct), Trinity’s isogroup designation file.
• Schedule benchwork, order supplies

Oly epigenetics project

• Wrap my head around action plan, steps for analysis